Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide export outer membrane proteinSAMN06295920_102508Not AvailablePositive1310438 - 131108823193.3
polysaccharide chain length determinant protein, pep-cterm locus subfamilySAMN06295920_102509Not AvailablePositive1311118 - 131263855228.0
exopolysaccharide/pep-cterm locus tyrosine autokinaseSAMN06295920_102510Not AvailablePositive1312643 - 131374938846.9
hypothetical proteinSAMN06295920_102511Not AvailablePositive1313746 - 131535357708.0
putative secretion atpase, pep-cterm locus subfamilySAMN06295920_102512Not AvailablePositive1315392 - 131693355049.4
polysaccharide deacetylase family protein, pep-cterm locus subfamilySAMN06295920_102513Not AvailablePositive1316908 - 131778632934.1
femab-related protein, pep-cterm system-associatedSAMN06295920_102514Not AvailablePositive1317790 - 131883937142.1
sugar transferase, pep-cterm/epsh1 system associatedSAMN06295920_102515Not AvailablePositive1318839 - 132002943661.8
asparagine synthase (glutamine-hydrolysing)SAMN06295920_102516Not AvailablePositive1320033 - 132193469681.7
peptidylprolyl isomeraseSAMN06295920_102517Not AvailableNegative1321943 - 132235914800.8

Displaying genes 1361 – 1370 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.