Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN06295920_102478 | Not Available | Positive | 1270173 - 1271159 | 33909.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295920_102479 | Not Available | Positive | 1271219 - 1272439 | 44824.1 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN06295920_102480 | Not Available | Negative | 1272769 - 1274049 | 42304.2 |
| sulfotransferase domain-containing protein | SAMN06295920_102481 | Not Available | Negative | 1274438 - 1275208 | 29443.9 |
| hlyd family secretion protein/membrane fusion protein, epimerase transport system | SAMN06295920_102482 | Not Available | Negative | 1275205 - 1276620 | 51058.6 |
| atp-binding cassette, subfamily c | SAMN06295920_102483 | Not Available | Negative | 1276617 - 1278338 | 61556.5 |
| outer membrane protein/outer membrane protein, s-layer protein transport system | SAMN06295920_102484 | Not Available | Negative | 1278427 - 1279995 | 56824.0 |
| glycosyltransferase, gt2 family | SAMN06295920_102485 | Not Available | Positive | 1280314 - 1284474 | 151306.0 |
| hypothetical protein | SAMN06295920_102486 | Not Available | Positive | 1284526 - 1287177 | 95675.5 |
| o-methyltransferase | SAMN06295920_102487 | Not Available | Negative | 1287192 - 1287800 | 23639.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.