Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN06295920_102468 | Not Available | Positive | 1255952 - 1256833 | 32065.1 |
| Trna-leu | Not Available | Not Available | Positive | 1256964 - 1257050 | Not Available |
| hypothetical protein | SAMN06295920_102470 | Not Available | Positive | 1257451 - 1259613 | 77174.0 |
| hypothetical protein | SAMN06295920_102471 | Not Available | Positive | 1259610 - 1260353 | 26720.8 |
| gscfa family protein | SAMN06295920_102472 | Not Available | Positive | 1260350 - 1261456 | 39645.8 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN06295920_102473 | Not Available | Positive | 1261498 - 1263234 | 64138.2 |
| methyltransferase domain-containing protein | SAMN06295920_102474 | Not Available | Negative | 1263247 - 1264215 | 35190.4 |
| putative papain-like cysteine peptidase | SAMN06295920_102475 | Not Available | Negative | 1264280 - 1264945 | 24994.8 |
| hypothetical protein | SAMN06295920_102476 | Not Available | Positive | 1264981 - 1266261 | 45694.8 |
| rhamnan synthesis protein f | SAMN06295920_102477 | Not Available | Positive | 1266258 - 1270163 | 141140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.