Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN06295920_102438 | Not Available | Positive | 1225411 - 1226166 | 27207.7 |
| ahpc/tsa family protein | SAMN06295920_102439 | Not Available | Positive | 1226200 - 1227276 | 40152.7 |
| hypothetical protein | SAMN06295920_102440 | Not Available | Negative | 1227286 - 1227918 | 21836.3 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN06295920_102441 | Not Available | Negative | 1227915 - 1230080 | 75922.5 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN06295920_102442 | Not Available | Negative | 1230077 - 1230538 | 16090.2 |
| putative mrna 3-end processing factor | SAMN06295920_102443 | Not Available | Positive | 1230615 - 1231676 | 38406.9 |
| dna ligase-1 | SAMN06295920_102444 | Not Available | Positive | 1231847 - 1233445 | 58751.2 |
| methyl-accepting chemotaxis sensory transducer | SAMN06295920_102445 | Not Available | Negative | 1233622 - 1235028 | 50687.0 |
| dna end-binding protein ku | SAMN06295920_102446 | Not Available | Positive | 1235142 - 1235999 | 31776.3 |
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN06295920_102447 | Not Available | Positive | 1236003 - 1238525 | 92215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.