Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine protein phosphatase 1SAMN06295920_102428Not AvailablePositive1216448 - 121729031051.8
diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)SAMN06295920_102429Not AvailablePositive1217357 - 122002094617.7
very-short-patch-repair endonucleaseSAMN06295920_102430Not AvailableNegative1220079 - 122038411552.0
phosphoribosylformylglycinamidine synthase subunit iiSAMN06295920_102431Not AvailableNegative1220421 - 122259576714.8
nicotinamide-nucleotide amidaseSAMN06295920_102432Not AvailableNegative1222637 - 122314617610.2
hypothetical proteinSAMN06295920_102433Not AvailableNegative1223143 - 122353514768.5
hemerythrin hhe cation binding domain-containing proteinSAMN06295920_102434Not AvailableNegative1223621 - 122413319150.7
hypothetical proteinSAMN06295920_102435Not AvailablePositive1224317 - 122468812380.2
hypothetical proteinSAMN06295920_102436Not AvailablePositive1224681 - 12248485906.77
rna polymerase sigma-70 factor, ecf subfamilySAMN06295920_102437Not AvailablePositive1224879 - 122542120179.2

Displaying genes 1281 – 1290 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.