Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferaseSAMN06295920_102408Not AvailableNegative1195659 - 119681941568.6
cell division protein ftswSAMN06295920_102409Not AvailableNegative1196816 - 119803343370.2
udp-n-acetylmuramoylalanine--d-glutamate ligaseSAMN06295920_102410Not AvailableNegative1198030 - 119931044359.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseSAMN06295920_102411Not AvailableNegative1199307 - 120037738210.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN06295920_102412Not AvailableNegative1200365 - 120178048850.4
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseSAMN06295920_102413Not AvailableNegative1201777 - 120322850428.1
cell division protein ftsi (penicillin-binding protein 3)SAMN06295920_102414Not AvailableNegative1203215 - 120495462576.1
hypothetical proteinSAMN06295920_102415Not AvailableNegative1204951 - 120556522195.7
16s rrna (cytosine1402-n4)-methyltransferaseSAMN06295920_102416Not AvailableNegative1205562 - 120653034634.2
mraz proteinSAMN06295920_102417Not AvailableNegative1206527 - 120709920611.8

Displaying genes 1261 – 1270 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.