Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative (di)nucleoside polyphosphate hydrolaseSAMN06295920_102378Not AvailablePositive1163093 - 116356918072.7
iron complex outermembrane recepter proteinSAMN06295920_102379Not AvailablePositive1163656 - 116584278435.4
uncharacterized iron-regulated membrane proteinSAMN06295920_102380Not AvailablePositive1165890 - 116690037076.6
peroxiredoxin q/bcpSAMN06295920_102381Not AvailableNegative1166895 - 116735616460.7
glutamate-ammonia ligase adenylyltransferaseSAMN06295920_102382Not AvailableNegative1167406 - 116918462870.7
glutamate-ammonia-ligase adenylyltransferaseSAMN06295920_102383Not AvailableNegative1169413 - 117209797281.4
rna polymerase sigma-70 factor, ecf subfamilySAMN06295920_102384Not AvailableNegative1172408 - 117307924922.7
chey chemotaxis protein or a chey-like rec (receiver) domainSAMN06295920_102385Not AvailableNegative1173209 - 117400328702.0
hypothetical proteinSAMN06295920_102386Not AvailablePositive1174274 - 11744837369.58
two-component sensor histidine kinase, contains hiska and hatpase domainsSAMN06295920_102387Not AvailablePositive1174545 - 117608655869.9

Displaying genes 1231 – 1240 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.