Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit 1SAMN06295920_102338Not AvailablePositive1127662 - 112935062133.0
protoheme ix farnesyltransferaseSAMN06295920_102339Not AvailablePositive1129434 - 113034232028.1
hypothetical proteinSAMN06295920_102340Not AvailablePositive1130339 - 11304674857.06
cytochrome c oxidase assembly protein subunit 11SAMN06295920_102341Not AvailablePositive1130464 - 113104220648.0
cytochrome c oxidase subunit 3SAMN06295920_102342Not AvailablePositive1131077 - 113194332197.4
uncharacterized conserved protein, duf983 familySAMN06295920_102343Not AvailablePositive1132031 - 113241413454.0
cytochrome oxidase assembly protein shyy1SAMN06295920_102344Not AvailablePositive1132414 - 113304622652.1
malonyl coa-acyl carrier protein transacylaseSAMN06295920_102345Not AvailableNegative1133048 - 113407937077.0
branched-chain alpha-keto acid dehydrogenase e1 componentSAMN06295920_102346Not AvailableNegative1134072 - 113627979044.6
predicted flavoprotein czco associated with the cation diffusion facilitator czcdSAMN06295920_102347Not AvailablePositive1136560 - 113807755154.6

Displaying genes 1191 – 1200 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.