Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_10454 | Not Available | Negative | 1990650 - 1990970 | 11361.4 |
| Virion associated protein | SAMN06295920_10455 | Not Available | Negative | 1990970 - 1991428 | 15521.4 |
| Major capsid protein | SAMN06295920_10456 | Not Available | Negative | 1991441 - 1992565 | 40744.4 |
| Attr | Not Available | Not Available | Positive | 2005499 - 2005511 | Not Available |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 194 - 1684 | 18.01 |
| acyl-coa dehydrogenase, n-terminal domain | SAMN06295920_1011 | Not Available | Negative | 1 - 377 | 14004.4 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_1012 | Not Available | Positive | 470 - 1369 | 32467.4 |
| transcriptional regulator, tetr family | SAMN06295920_1013 | Not Available | Positive | 1451 - 2101 | 23911.3 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 2412 - 5204 | 18.01 |
| spermidine dehydrogenase | SAMN06295920_1014 | Not Available | Negative | 2198 - 4138 | 70982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.