Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_102298 | Not Available | Positive | 1076497 - 1076709 | 7341.93 |
| malate synthase | SAMN06295920_102299 | Not Available | Positive | 1076816 - 1078918 | 75142.8 |
| ef-hand domain pair | SAMN06295920_102300 | Not Available | Negative | 1078994 - 1079389 | 14217.9 |
| protein tonb | SAMN06295920_102301 | Not Available | Negative | 1079475 - 1080197 | 26330.1 |
| outer membrane protein, multidrug efflux system | SAMN06295920_102302 | Not Available | Negative | 1080237 - 1081712 | 51369.6 |
| multidrug efflux pump | SAMN06295920_102303 | Not Available | Negative | 1081709 - 1084855 | 112541.0 |
| membrane fusion protein, multidrug efflux system | SAMN06295920_102304 | Not Available | Negative | 1084866 - 1086032 | 40575.0 |
| hypothetical protein | SAMN06295920_102305 | Not Available | Negative | 1086221 - 1086496 | 11692.5 |
| putative acetyltransferase | SAMN06295920_102306 | Not Available | Negative | 1086596 - 1087090 | 16796.0 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN06295920_102307 | Not Available | Negative | 1087099 - 1088226 | 41836.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.