Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidoglycan lipid ii flippase | SAMN06295920_102288 | Not Available | Negative | 1066426 - 1068003 | 56432.7 |
| protein translocase subunit secb | SAMN06295920_102289 | Not Available | Negative | 1068179 - 1068679 | 17974.2 |
| predicted lipid-binding transport protein, tim44 family | SAMN06295920_102290 | Not Available | Positive | 1068932 - 1069582 | 23436.4 |
| membrane-bound lytic murein transglycosylase a | SAMN06295920_102291 | Not Available | Positive | 1069579 - 1070826 | 43707.2 |
| dna-nicking endonuclease, smr domain | SAMN06295920_102292 | Not Available | Positive | 1070804 - 1071391 | 21299.5 |
| mfs transporter, dha1 family, florfenicol/chloramphenicol resistance protein | SAMN06295920_102293 | Not Available | Negative | 1071388 - 1072587 | 41757.4 |
| hypothetical protein | SAMN06295920_102294 | Not Available | Negative | 1072851 - 1073693 | 25704.0 |
| subtilase family protein | SAMN06295920_102295 | Not Available | Negative | 1073804 - 1075069 | 42227.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295920_102296 | Not Available | Positive | 1075108 - 1075692 | 22002.5 |
| hypothetical protein | SAMN06295920_102297 | Not Available | Positive | 1075689 - 1076390 | 24352.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.