Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | SAMN06295920_102248 | Not Available | Negative | 1021685 - 1022611 | 35190.0 |
| exodeoxyribonuclease-3 | SAMN06295920_102249 | Not Available | Positive | 1022826 - 1023617 | 30391.1 |
| gtp cyclohydrolase ii | SAMN06295920_102250 | Not Available | Positive | 1023614 - 1024675 | 37211.8 |
| l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg family | SAMN06295920_102251 | Not Available | Positive | 1024672 - 1025178 | 17631.1 |
| dna-binding transcriptional regulator, merr family | SAMN06295920_102252 | Not Available | Negative | 1025342 - 1025752 | 15794.2 |
| long-chain acyl-coa synthetase | SAMN06295920_102253 | Not Available | Negative | 1025757 - 1027472 | 61637.5 |
| long-chain fatty acid transport protein | SAMN06295920_102254 | Not Available | Negative | 1027490 - 1028800 | 46191.7 |
| uncharacterized conserved protein, duf2147 family | SAMN06295920_102255 | Not Available | Negative | 1028835 - 1029233 | 14260.3 |
| acetyl-coa acyltransferase | SAMN06295920_102256 | Not Available | Positive | 1029406 - 1030542 | 38858.9 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN06295920_102257 | Not Available | Positive | 1030545 - 1032851 | 81416.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.