Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN06295920_102138Not AvailableNegative901295 - 90213130345.6
2,3-dihydroxybiphenyl 1,2-dioxygenaseSAMN06295920_102139Not AvailableNegative902150 - 90314836500.0
4-carboxymuconolactone decarboxylaseSAMN06295920_102140Not AvailablePositive903180 - 90373419160.0
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_102141Not AvailableNegative903739 - 90504648499.4
gluconolactonaseSAMN06295920_102142Not AvailableNegative905058 - 90599034177.5
l-fuconolactonaseSAMN06295920_102143Not AvailableNegative906110 - 90698531209.6
hypothetical proteinSAMN06295920_102144Not AvailableNegative907003 - 9072247623.95
hypothetical proteinSAMN06295920_102145Not AvailableNegative907253 - 90862351302.4
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN06295920_102146Not AvailableNegative908627 - 90916619319.8
4-carboxymuconolactone decarboxylaseSAMN06295920_102147Not AvailableNegative909186 - 90956614217.9

Displaying genes 991 – 1000 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.