Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative prophage protein | SAMN06295920_103348 | Not Available | Negative | 1740445 - 1740873 | 15633.7 |
| Putative class i holin | SAMN06295920_103349 | Not Available | Negative | 1741004 - 1741324 | 11405.6 |
| Attl | Not Available | Not Available | Positive | 1966729 - 1966741 | Not Available |
| Site-specific recombinase for integration and excision | SAMN06295920_10437 | Not Available | Positive | 1975955 - 1977454 | 56553.1 |
| nuclease homologue | SAMN06295920_10438 | Not Available | Negative | 1977479 - 1977736 | 9373.09 |
| hypothetical protein | SAMN06295920_10439 | Not Available | Negative | 1978277 - 1978933 | 21943.6 |
| Antitoxin hicb | SAMN06295920_10440 | Not Available | Positive | 1979725 - 1980024 | 10524.2 |
| hypothetical protein | SAMN06295920_10441 | Not Available | Negative | 1980152 - 1980337 | 6435.78 |
| hypothetical protein | SAMN06295920_10442 | Not Available | Negative | 1980334 - 1980594 | 9330.43 |
| hypothetical protein | SAMN06295920_10443 | Not Available | Negative | 1980591 - 1980827 | 8067.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.