Pseudomonas marincola

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas marincola is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 25.0 °C. This organism is part of a diverse genus known for its metabolic versatility and ability to inhabit various environments, particularly aquatic systems. Its Gram-negative cell wall structure is characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can contribute to its resilience in fluctuating environmental conditions. The preference of Pseudomonas marincola for aerobic conditions suggests its reliance on oxygen for respiration, which may also influence its ecological roles, such as in the degradation of organic matter in marine habitats. This capability is particularly significant in nutrient cycling processes, where the bacterium may engage in the breakdown of complex organic compounds, thereby contributing to the overall health and stability of marine ecosystems. The optimal growth temperature of 25.0 °C aligns with typical marine environments, indicating that Pseudomonas marincola could play a role in the microbial dynamics of coastal waters. Its metabolic characteristics and habitat preferences position it as a potential participant in biogeochemical cycles, underscoring its importance in maintaining ecological balance in marine environments. Understanding the specific functions and interactions of Pseudomonas marincola within its ecosystem could provide insights into microbial community structure and function in marine settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas marincola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas marincola
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas marincola strain JCM 14761 genome assembly, contig:

Gene Summary

Adenine Count

1094496 bp

Thymine Count

1060650 bp

Guanine Count

1405561 bp

Cytosine Count

1459887 bp

Genome Length

5020984 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216264_109156Not AvailableNegative3452229 - 34523906234.63
alkylated dna repair dioxygenase alkbSAMN05216264_109157Not AvailableNegative3452387 - 345298922991.2
hypothetical proteinSAMN05216264_109158Not AvailableNegative3453034 - 345334511428.3
atp-dependent helicase hepaSAMN05216264_109159Not AvailablePositive3453511 - 3456354106432.0
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216264_109160Not AvailablePositive3456551 - 345821262404.2
hydroxypyruvate isomeraseSAMN05216264_109161Not AvailableNegative3458224 - 345901528086.1
3-hydroxyisobutyrate dehydrogenaseSAMN05216264_109162Not AvailableNegative3459012 - 345990231072.8
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05216264_109163Not AvailablePositive3460061 - 346041412698.2
arac-type dna-binding proteinSAMN05216264_109164Not AvailablePositive3460420 - 346124130132.0
threonine/homoserine/homoserine lactone efflux proteinSAMN05216264_109165Not AvailableNegative3461243 - 346183021022.3

Displaying genes 3191 – 3200 of 4670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.