Pseudomonas marincola

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas marincola is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 25.0 °C. This organism is part of a diverse genus known for its metabolic versatility and ability to inhabit various environments, particularly aquatic systems. Its Gram-negative cell wall structure is characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can contribute to its resilience in fluctuating environmental conditions. The preference of Pseudomonas marincola for aerobic conditions suggests its reliance on oxygen for respiration, which may also influence its ecological roles, such as in the degradation of organic matter in marine habitats. This capability is particularly significant in nutrient cycling processes, where the bacterium may engage in the breakdown of complex organic compounds, thereby contributing to the overall health and stability of marine ecosystems. The optimal growth temperature of 25.0 °C aligns with typical marine environments, indicating that Pseudomonas marincola could play a role in the microbial dynamics of coastal waters. Its metabolic characteristics and habitat preferences position it as a potential participant in biogeochemical cycles, underscoring its importance in maintaining ecological balance in marine environments. Understanding the specific functions and interactions of Pseudomonas marincola within its ecosystem could provide insights into microbial community structure and function in marine settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas marincola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas marincola
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas marincola strain JCM 14761 genome assembly, contig:

Gene Summary

Adenine Count

1094496 bp

Thymine Count

1060650 bp

Guanine Count

1405561 bp

Cytosine Count

1459887 bp

Genome Length

5020984 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrite reductase (nadh) large subunitSAMN05216264_105154Not AvailablePositive2224412 - 222697392357.3
nitrite reductase (nadh) small subunitSAMN05216264_105155Not AvailablePositive2226973 - 222736514086.8
oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseSAMN05216264_105156Not AvailableNegative2227579 - 222963673274.9
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN05216264_105157Not AvailableNegative2229783 - 223085939551.7
ring-1,2-phenylacetyl-coa epoxidase subunit paadSAMN05216264_105158Not AvailableNegative2230885 - 223141819171.7
ring-1,2-phenylacetyl-coa epoxidase subunit paacSAMN05216264_105159Not AvailableNegative2231405 - 223216028232.4
ring-1,2-phenylacetyl-coa epoxidase subunit paabSAMN05216264_105160Not AvailableNegative2232169 - 223245010438.2
ring-1,2-phenylacetyl-coa epoxidase subunit paaaSAMN05216264_105161Not AvailableNegative2232474 - 223346638053.3
phenylacetate-coa ligaseSAMN05216264_105162Not AvailableNegative2233689 - 223499949125.1
3-oxoadipyl-coa thiolaseSAMN05216264_105163Not AvailableNegative2235096 - 223630142326.9

Displaying genes 2071 – 2080 of 4670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.