Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 1780408 - 1780457 | Not Available |
| Putative tape measure protein | CC99x_007775 | Not Available | Negative | 1786415 - 1787638 | 45306.2 |
| hypothetical protein | CC99x_007780 | Not Available | Negative | 1787684 - 1788094 | 14708.4 |
| Tail tape measure protein | CC99x_007785 | Not Available | Negative | 1788147 - 1788455 | 10839.7 |
| hypothetical protein | CC99x_007790 | Not Available | Negative | 1788554 - 1788763 | 7760.99 |
| hypothetical protein | CC99x_007795 | Not Available | Positive | 1788780 - 1789307 | 20091.7 |
| Issod1, transposase orfa | CC99x_007800 | Not Available | Positive | 1790271 - 1790570 | 11204.5 |
| Putative transposase orfb | CC99x_007805 | Not Available | Positive | 1790669 - 1791040 | 13802.9 |
| hypothetical protein | CC99x_007810 | Not Available | Positive | 1791125 - 1791529 | 15755.0 |
| Issod1, transposase orfa | CC99x_007815 | Not Available | Positive | 1791703 - 1792017 | 12091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.