Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | CC99x_004835 | Not Available | Positive | 1104058 - 1104843 | 29993.7 |
| ribonuclease hi | CC99x_004840 | Not Available | Positive | 1104863 - 1105306 | 16687.7 |
| dna polymerase iii subunit epsilon | CC99x_004845 | Not Available | Positive | 1105307 - 1106020 | 27072.3 |
| hypothetical protein | CC99x_004850 | Not Available | Positive | 1106461 - 1109292 | 108446.0 |
| sodium:proton antiporter nhad | CC99x_004855 | Not Available | Negative | 1109372 - 1110823 | 53564.5 |
| mfs transporter | CC99x_004860 | Not Available | Negative | 1110837 - 1112126 | 47357.5 |
| ydbh domain-containing protein | CC99x_004865 | Not Available | Positive | 1112490 - 1114526 | 77087.8 |
| ynbe family lipoprotein | CC99x_004870 | Not Available | Positive | 1114731 - 1114913 | 6747.62 |
| ydbl family protein | CC99x_004875 | Not Available | Positive | 1114949 - 1115263 | 11277.6 |
| hypothetical protein | CC99x_004880 | Not Available | Negative | 1115634 - 1116446 | 31011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.