Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | CC99x_004785 | Not Available | Negative | 1093023 - 1093682 | 24987.7 |
| ankyrin repeat domain-containing protein | CC99x_004790 | Not Available | Positive | 1093812 - 1094663 | 31251.4 |
| bax inhibitor-1/ycca family protein | CC99x_004795 | Not Available | Negative | 1094739 - 1095413 | 23964.9 |
| Trna-ser | Not Available | Not Available | Positive | 1095695 - 1095782 | Not Available |
| uvry/sira/gaca family response regulator transcription factor | CC99x_004805 | Not Available | Positive | 1096018 - 1096686 | 24455.8 |
| excinuclease abc subunit uvrc | CC99x_004810 | Not Available | Positive | 1096711 - 1098525 | 69151.7 |
| hypothetical protein | CC99x_004815 | Not Available | Positive | 1098773 - 1100989 | 83640.4 |
| hypothetical protein | CC99x_004820 | Not Available | Negative | 1101080 - 1101778 | 26458.8 |
| transglycosylase slt domain-containing protein | CC99x_004825 | Not Available | Negative | 1101885 - 1103105 | 45766.0 |
| hydroxyacylglutathione hydrolase | CC99x_004830 | Not Available | Negative | 1103251 - 1104027 | 28916.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.