Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CC99x_004735 | Not Available | Negative | 1079625 - 1080659 | 40033.7 |
| hypothetical protein | CC99x_004740 | Not Available | Negative | 1081054 - 1083204 | 81201.0 |
| translation initiation factor if-1 | CC99x_004745 | Not Available | Negative | 1083468 - 1083722 | 9597.47 |
| leucyl/phenylalanyl-trna--protein transferase | CC99x_004750 | Not Available | Negative | 1083802 - 1084542 | 27664.4 |
| thioredoxin-disulfide reductase | CC99x_004755 | Not Available | Negative | 1084549 - 1085505 | 34000.7 |
| dna translocase ftsk 4tm domain-containing protein | CC99x_004760 | Not Available | Positive | 1085806 - 1088304 | 91745.5 |
| outer membrane lipoprotein chaperone lola | CC99x_004765 | Not Available | Positive | 1088317 - 1088952 | 23342.9 |
| replication-associated recombination protein a | CC99x_004770 | Not Available | Positive | 1088956 - 1090272 | 48515.0 |
| serine--trna ligase | CC99x_004775 | Not Available | Positive | 1090269 - 1091546 | 48433.1 |
| hypothetical protein | CC99x_004780 | Not Available | Positive | 1091578 - 1092837 | 46305.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.