Candidatus Berkiella cookevillensis

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Candidatus Berkiellales

Family

Candidatus Berkiellaceae

Genus

Candidatus Berkiella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCandidatus Berkiellales
FamilyCandidatus Berkiellaceae
GenusCandidatus Berkiella
SpeciesCandidatus Berkiella cookevillensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiofilm sample from a cooling tower
Biotic relationshipNot Available
Host(s)Amoeba, Acanthamoeba polyphaga
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Berkiella cookevillensis strain CC99 CC99_02, whole

Gene Summary

Adenine Count

924980 bp

Thymine Count

927602 bp

Guanine Count

565100 bp

Cytosine Count

567154 bp

Genome Length

2984836 bp

Protein-coding Genes

2513 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCC99x_004685Not AvailableNegative1066823 - 106794441638.0
adenylosuccinate lyaseCC99x_004690Not AvailableNegative1068050 - 106942652585.5
trna 2-thiouridine(34) synthase mnmaCC99x_004695Not AvailableNegative1069440 - 107052841240.0
nadp-dependent isocitrate dehydrogenaseCC99x_004700Not AvailablePositive1070689 - 107194545880.4
cold shock domain-containing protein cspdCC99x_004705Not AvailableNegative1072138 - 10724049675.18
atp-dependent clp protease adapter clpsCC99x_004710Not AvailablePositive1072634 - 107296312613.5
atp-dependent clp protease atp-binding subunit clpaCC99x_004715Not AvailablePositive1072994 - 107526484230.7
hypothetical proteinCC99x_004720Not AvailablePositive1075503 - 107606621013.4
hypothetical proteinCC99x_004725Not AvailableNegative1076165 - 107756253879.1
ankyrin repeat domain-containing proteinCC99x_004730Not AvailableNegative1077784 - 107929257292.2

Displaying genes 951 – 960 of 2571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.