Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CC99x_004635 | Not Available | Positive | 1052221 - 1054878 | 99885.1 |
| dihydrolipoyllysine-residue acetyltransferase | CC99x_004640 | Not Available | Positive | 1054893 - 1056530 | 58236.2 |
| dihydrolipoyl dehydrogenase | CC99x_004645 | Not Available | Positive | 1056562 - 1057980 | 50947.0 |
| vanz family protein | CC99x_004650 | Not Available | Negative | 1058168 - 1058995 | 32059.6 |
| sodium/proline symporter putp | CC99x_004655 | Not Available | Positive | 1059386 - 1060852 | 53496.5 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | CC99x_004660 | Not Available | Positive | 1060865 - 1063471 | 96450.7 |
| hypothetical protein | CC99x_004665 | Not Available | Negative | 1063468 - 1063605 | 5068.11 |
| transposase family protein | CC99x_004670 | Not Available | Negative | 1063617 - 1064786 | 45133.8 |
| aldehyde dehydrogenase family protein | CC99x_004675 | Not Available | Positive | 1064897 - 1065457 | 19927.1 |
| hypothetical protein | CC99x_004680 | Not Available | Positive | 1065591 - 1066610 | 39320.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.