Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | CC99x_004585 | Not Available | Negative | 1041446 - 1042624 | 42638.1 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | CC99x_004590 | Not Available | Negative | 1042635 - 1043993 | 50939.9 |
| anthranilate phosphoribosyltransferase | CC99x_004595 | Not Available | Negative | 1043987 - 1045045 | 38856.8 |
| aminodeoxychorismate/anthranilate synthase component ii | CC99x_004600 | Not Available | Negative | 1045038 - 1045673 | 23905.0 |
| chorismate-binding protein | CC99x_004605 | Not Available | Negative | 1045717 - 1047174 | 54523.4 |
| 3-deoxy-7-phosphoheptulonate synthase | CC99x_004610 | Not Available | Negative | 1047187 - 1048008 | 29776.2 |
| hypothetical protein | CC99x_004615 | Not Available | Positive | 1048306 - 1048872 | 21509.5 |
| pas domain-containing protein | CC99x_004620 | Not Available | Positive | 1049078 - 1050835 | 67128.0 |
| retroviral-like aspartic protease family protein | CC99x_004625 | Not Available | Negative | 1050858 - 1051433 | 20970.4 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CC99x_004630 | Not Available | Positive | 1051607 - 1052173 | 21293.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.