Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase family protein | CC99x_004535 | Not Available | Positive | 1019584 - 1020735 | 42131.5 |
| endonuclease | CC99x_004540 | Not Available | Negative | 1021060 - 1021767 | 27239.2 |
| glutaredoxin family protein | CC99x_004545 | Not Available | Negative | 1021789 - 1022169 | 13898.6 |
| hypothetical protein | CC99x_004550 | Not Available | Positive | 1022383 - 1023084 | 26919.5 |
| vwa domain-containing protein | CC99x_004555 | Not Available | Negative | 1023167 - 1034887 | 409410.0 |
| hypothetical protein | CC99x_004560 | Not Available | Positive | 1035350 - 1036369 | 39468.6 |
| acetate/propionate family kinase | CC99x_004565 | Not Available | Positive | 1036738 - 1038588 | 68096.8 |
| maoc family dehydratase | CC99x_004570 | Not Available | Positive | 1038749 - 1039183 | 15653.1 |
| acyltransferase | CC99x_004575 | Not Available | Negative | 1039301 - 1040245 | 37007.4 |
| tryptophan synthase subunit alpha | CC99x_004580 | Not Available | Negative | 1040511 - 1041308 | 29158.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.