Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CC99x_004485 | Not Available | Positive | 1010120 - 1010737 | 23674.6 |
| qace family quaternary ammonium compound efflux smr transporter | CC99x_004490 | Not Available | Positive | 1010748 - 1011074 | 11797.0 |
| tubulin--tyrosine ligase family protein | CC99x_004495 | Not Available | Positive | 1011080 - 1012135 | 41279.1 |
| hypothetical protein | CC99x_004500 | Not Available | Positive | 1012229 - 1013263 | 39816.1 |
| glutamate racemase | CC99x_004505 | Not Available | Positive | 1013272 - 1014129 | 31324.0 |
| mase1 domain-containing protein | CC99x_004510 | Not Available | Negative | 1014126 - 1015079 | 36831.9 |
| hypothetical protein | CC99x_004515 | Not Available | Positive | 1015088 - 1015699 | 23568.5 |
| hypothetical protein | CC99x_004520 | Not Available | Negative | 1016027 - 1017427 | 52974.9 |
| abc transporter atp-binding protein | CC99x_004525 | Not Available | Negative | 1017424 - 1018356 | 34651.2 |
| hypothetical protein | CC99x_004530 | Not Available | Positive | 1018469 - 1019530 | 39175.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.