Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | CC99x_004435 | Not Available | Positive | 1000793 - 1001944 | 40304.2 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | CC99x_004440 | Not Available | Positive | 1002032 - 1002955 | 33939.6 |
| class iib bacteriocin, lactobin a/cerein 7b family | CC99x_004445 | Not Available | Positive | 1003207 - 1003443 | 7720.64 |
| hypothetical protein | CC99x_004450 | Not Available | Positive | 1003467 - 1003739 | 9229.2 |
| tetr/acrr family transcriptional regulator | CC99x_004455 | Not Available | Positive | 1003889 - 1004464 | 21744.6 |
| tigr01777 family oxidoreductase | CC99x_004460 | Not Available | Positive | 1004586 - 1005485 | 33385.2 |
| saccharopine dehydrogenase nadp-binding domain-containing protein | CC99x_004465 | Not Available | Positive | 1005494 - 1006639 | 43362.8 |
| duf2269 domain-containing protein | CC99x_004470 | Not Available | Positive | 1006640 - 1007107 | 17915.0 |
| hypothetical protein | CC99x_004475 | Not Available | Negative | 1007497 - 1008807 | 49426.8 |
| m48 family metalloprotease | CC99x_004480 | Not Available | Positive | 1008954 - 1010063 | 42440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.