Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CC99x_004385 | Not Available | Positive | 988930 - 990270 | 48499.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CC99x_004390 | Not Available | Positive | 990281 - 991363 | 39798.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CC99x_004395 | Not Available | Positive | 991378 - 992760 | 50154.3 |
| putative lipid ii flippase ftsw | CC99x_004400 | Not Available | Positive | 992777 - 993952 | 43255.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CC99x_004405 | Not Available | Positive | 993978 - 995087 | 40289.8 |
| udp-n-acetylmuramate--l-alanine ligase | CC99x_004410 | Not Available | Positive | 995167 - 996564 | 51056.4 |
| udp-n-acetylmuramate dehydrogenase | CC99x_004415 | Not Available | Positive | 996568 - 997521 | 34650.8 |
| d-alanine--d-alanine ligase | CC99x_004420 | Not Available | Positive | 997524 - 998573 | 37727.5 |
| cell division protein ftsq/divib | CC99x_004425 | Not Available | Positive | 998644 - 999384 | 28431.7 |
| cell division protein ftsa | CC99x_004430 | Not Available | Positive | 999498 - 1000733 | 44588.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.