Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_004330 | Not Available | Positive | 977731 - 978009 | 10528.5 |
| hypothetical protein | CC99x_004335 | Not Available | Positive | 978100 - 978273 | 6340.6 |
| penicillin-binding protein activator | CC99x_004340 | Not Available | Negative | 978537 - 980438 | 71615.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CC99x_004345 | Not Available | Positive | 980472 - 981332 | 31720.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 982944 - 983482 | Not Available |
| division/cell wall cluster transcriptional repressor mraz | CC99x_004360 | Not Available | Positive | 983924 - 984466 | 20340.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CC99x_004365 | Not Available | Positive | 984463 - 985386 | 34669.2 |
| cell division protein ftsl | CC99x_004370 | Not Available | Positive | 985406 - 985702 | 10921.3 |
| penicillin-binding protein 2 | CC99x_004375 | Not Available | Positive | 985699 - 987387 | 62221.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CC99x_004380 | Not Available | Positive | 987389 - 988909 | 55778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.