Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_004280 | Not Available | Negative | 967782 - 969146 | 50727.0 |
| dicarboxylate/amino acid:cation symporter | CC99x_004285 | Not Available | Negative | 969307 - 970521 | 44853.5 |
| hypothetical protein | CC99x_004290 | Not Available | Negative | 970741 - 971187 | 16330.3 |
| thiol peroxidase | CC99x_004295 | Not Available | Negative | 971542 - 972045 | 18016.7 |
| tetr/acrr family transcriptional regulator | CC99x_004300 | Not Available | Negative | 972168 - 972746 | 21719.0 |
| nuclear transport factor 2 family protein | CC99x_004305 | Not Available | Positive | 972907 - 973302 | 15169.0 |
| pirin family protein | CC99x_004310 | Not Available | Positive | 973333 - 974253 | 34355.5 |
| dna-3-methyladenine glycosylase i | CC99x_004315 | Not Available | Positive | 974329 - 974919 | 22783.7 |
| methyltransferase domain-containing protein | CC99x_004320 | Not Available | Positive | 974921 - 975763 | 31389.0 |
| hypothetical protein | CC99x_004325 | Not Available | Negative | 975915 - 977276 | 50666.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.