Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CC99x_004230 | Not Available | Positive | 959327 - 959692 | 13872.7 |
| atp phosphoribosyltransferase | CC99x_004235 | Not Available | Positive | 959640 - 960530 | 33175.5 |
| histidinol dehydrogenase | CC99x_004240 | Not Available | Positive | 960554 - 961852 | 47237.4 |
| histidinol-phosphate transaminase | CC99x_004245 | Not Available | Positive | 961845 - 962894 | 39557.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | CC99x_004250 | Not Available | Positive | 962891 - 963961 | 39891.0 |
| imidazole glycerol phosphate synthase subunit hish | CC99x_004255 | Not Available | Positive | 963958 - 964548 | 21562.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CC99x_004260 | Not Available | Positive | 964564 - 965301 | 27170.7 |
| imidazole glycerol phosphate synthase subunit hisf | CC99x_004265 | Not Available | Positive | 965289 - 966062 | 28503.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | CC99x_004270 | Not Available | Positive | 966074 - 966865 | 29536.8 |
| hypothetical protein | CC99x_004275 | Not Available | Positive | 966969 - 967736 | 28000.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.