Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CC99x_004180 | Not Available | Negative | 948526 - 949266 | 27451.1 |
| argr family transcriptional regulator | CC99x_004185 | Not Available | Positive | 949385 - 949843 | 17068.8 |
| dicarboxylate/amino acid:cation symporter | CC99x_004190 | Not Available | Negative | 949939 - 951192 | 45959.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CC99x_004195 | Not Available | Positive | 951777 - 952337 | 20906.9 |
| gnat family n-acetyltransferase | CC99x_004200 | Not Available | Positive | 952340 - 953089 | 28498.1 |
| nadar family protein | CC99x_004205 | Not Available | Positive | 953158 - 954612 | 54884.5 |
| hypothetical protein | CC99x_004210 | Not Available | Negative | 954707 - 954940 | 8363.65 |
| hypothetical protein | CC99x_004215 | Not Available | Positive | 955125 - 957200 | 78308.4 |
| nad(p)h-dependent oxidoreductase | CC99x_004220 | Not Available | Negative | 957274 - 957825 | 20234.1 |
| m23 family metallopeptidase | CC99x_004225 | Not Available | Positive | 957881 - 959038 | 42609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.