Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methionine sulfoxide reductase b/a protein | CC99x_004130 | Not Available | Positive | 936381 - 937253 | 33145.3 |
| gnat family n-acetyltransferase | CC99x_004135 | Not Available | Positive | 937649 - 938149 | 19349.1 |
| hypothetical protein | CC99x_004140 | Not Available | Positive | 938368 - 938934 | 21887.8 |
| ankyrin repeat domain-containing protein | CC99x_004145 | Not Available | Positive | 939111 - 941993 | 109818.0 |
| sodium:alanine symporter family protein | CC99x_004150 | Not Available | Negative | 942031 - 943434 | 49412.9 |
| hypothetical protein | CC99x_004155 | Not Available | Positive | 943803 - 944594 | 30322.0 |
| argininosuccinate lyase | CC99x_004160 | Not Available | Negative | 944778 - 946013 | 46662.8 |
| argininosuccinate synthase | CC99x_004165 | Not Available | Negative | 946003 - 947226 | 45606.9 |
| atp-binding cassette domain-containing protein | CC99x_004170 | Not Available | Negative | 947236 - 947898 | 24244.9 |
| amino acid abc transporter permease | CC99x_004175 | Not Available | Negative | 947882 - 948529 | 24050.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.