Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4156 domain-containing protein | CC99x_004080 | Not Available | Positive | 925216 - 925593 | 14114.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | CC99x_004085 | Not Available | Positive | 925942 - 927183 | 46950.1 |
| peptidase domain-containing abc transporter | CC99x_004090 | Not Available | Positive | 927183 - 929297 | 79022.2 |
| phosphodiester glycosidase family protein | CC99x_004095 | Not Available | Negative | 929441 - 930724 | 48368.3 |
| hypothetical protein | CC99x_004100 | Not Available | Negative | 930718 - 931509 | 29785.6 |
| alpha/beta hydrolase | CC99x_004105 | Not Available | Positive | 931677 - 932867 | 45312.6 |
| glutamate--trna ligase | CC99x_004110 | Not Available | Positive | 933094 - 934485 | 52560.5 |
| Trna-ala | Not Available | Not Available | Positive | 934535 - 934610 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 934683 - 934758 | Not Available |
| protein kinase | CC99x_004125 | Not Available | Negative | 934877 - 935881 | 37984.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.