Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | CC99x_003980 | Not Available | Positive | 891120 - 892913 | 67666.1 |
| atp-dependent rna helicase hrpa | CC99x_003985 | Not Available | Positive | 892919 - 896815 | 150235.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CC99x_003990 | Not Available | Positive | 898943 - 899155 | 7917.64 |
| hypothetical protein | CC99x_003995 | Not Available | Positive | 899159 - 900166 | 38415.5 |
| hypothetical protein | CC99x_004000 | Not Available | Positive | 900142 - 900531 | 14585.7 |
| hypothetical protein | CC99x_004005 | Not Available | Positive | 900735 - 902120 | 52890.8 |
| nad(p)-dependent oxidoreductase | CC99x_004010 | Not Available | Positive | 902137 - 902973 | 30428.7 |
| hypothetical protein | CC99x_004015 | Not Available | Positive | 903203 - 907330 | 156196.0 |
| hypothetical protein | CC99x_004020 | Not Available | Positive | 907583 - 909019 | 51230.2 |
| vacj family lipoprotein | CC99x_004025 | Not Available | Positive | 909244 - 910074 | 30790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.