Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | CC99x_003880 | Not Available | Negative | 866194 - 866943 | 27317.4 |
| hypothetical protein | CC99x_003885 | Not Available | Negative | 867089 - 867472 | 14439.5 |
| hypothetical protein | CC99x_003890 | Not Available | Positive | 867659 - 868003 | 13052.7 |
| hypothetical protein | CC99x_003895 | Not Available | Negative | 868000 - 868974 | 36391.8 |
| formyltetrahydrofolate deformylase | CC99x_003900 | Not Available | Positive | 869083 - 869955 | 33505.6 |
| hypothetical protein | CC99x_003905 | Not Available | Positive | 870038 - 870661 | 23574.2 |
| hypothetical protein | CC99x_003910 | Not Available | Negative | 870727 - 873300 | 95816.9 |
| hypothetical protein | CC99x_003915 | Not Available | Negative | 873679 - 875427 | 66602.0 |
| hypothetical protein | CC99x_003920 | Not Available | Positive | 875596 - 876606 | 39112.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | CC99x_003925 | Not Available | Negative | 876875 - 878293 | 52463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.