Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | CC99x_000260 | Not Available | Negative | 58058 - 58411 | 13422.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | CC99x_000265 | Not Available | Positive | 58658 - 59272 | 22109.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CC99x_000270 | Not Available | Negative | 59346 - 60368 | 36783.5 |
| 30s ribosomal protein s21 | CC99x_000275 | Not Available | Positive | 60660 - 60929 | 10177.4 |
| gatb/yqey domain-containing protein | CC99x_000280 | Not Available | Positive | 60988 - 61446 | 17290.1 |
| dna primase | CC99x_000285 | Not Available | Positive | 61463 - 63352 | 71973.4 |
| rna polymerase sigma factor rpod | CC99x_000290 | Not Available | Positive | 63494 - 65389 | 71654.0 |
| Trna-met | Not Available | Not Available | Positive | 65501 - 65577 | Not Available |
| isl3 family transposase | CC99x_000305 | Not Available | Negative | 65906 - 67081 | 46779.2 |
| putative dna binding domain-containing protein | CC99x_000310 | Not Available | Positive | 67255 - 68595 | 49877.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.