Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompp1/fadl family transporter | CC99x_003830 | Not Available | Positive | 857141 - 858496 | 49121.6 |
| tetr/acrr family transcriptional regulator | CC99x_003835 | Not Available | Positive | 858674 - 859327 | 24287.3 |
| hypothetical protein | CC99x_003840 | Not Available | Negative | 859554 - 859988 | 15431.4 |
| l,d-transpeptidase | CC99x_003845 | Not Available | Positive | 860072 - 860557 | 18056.8 |
| beta-n-acetylhexosaminidase | CC99x_003850 | Not Available | Positive | 860565 - 861617 | 39040.7 |
| hypoxanthine-guanine phosphoribosyltransferase | CC99x_003855 | Not Available | Positive | 861687 - 862247 | 20472.7 |
| s-methyl-5'-thioinosine phosphorylase | CC99x_003860 | Not Available | Positive | 862240 - 862971 | 26934.5 |
| atp-binding protein | CC99x_003865 | Not Available | Negative | 863244 - 864365 | 43474.1 |
| thioesterase family protein | CC99x_003870 | Not Available | Negative | 864493 - 865014 | 20364.4 |
| beta-ketoacyl-acp synthase iii | CC99x_003875 | Not Available | Negative | 865029 - 866150 | 41376.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.