Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | CC99x_003780 | Not Available | Negative | 841484 - 843445 | 76421.9 |
| aminodeoxychorismate/anthranilate synthase component ii | CC99x_003785 | Not Available | Positive | 843671 - 844231 | 20245.9 |
| hypothetical protein | CC99x_003790 | Not Available | Positive | 844597 - 844788 | 7463.66 |
| transcriptional repressor lexa | CC99x_003795 | Not Available | Negative | 844785 - 845414 | 22681.3 |
| hypothetical protein | CC99x_003800 | Not Available | Negative | 846079 - 846378 | 11617.9 |
| acyl-coa dehydrogenase | CC99x_003805 | Not Available | Positive | 846743 - 849232 | 92027.3 |
| acetyl-coa c-acetyltransferase | CC99x_003810 | Not Available | Positive | 849184 - 850494 | 47056.9 |
| enoyl-coa hydratase/isomerase family protein | CC99x_003815 | Not Available | Positive | 850497 - 852551 | 75650.9 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | CC99x_003820 | Not Available | Positive | 852946 - 855264 | 86714.2 |
| acetyl-coa c-acyltransferase | CC99x_003825 | Not Available | Positive | 855306 - 856493 | 42243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.