Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_003730 | Not Available | Negative | 831125 - 831604 | 18246.6 |
| hypothetical protein | CC99x_003735 | Not Available | Negative | 831713 - 831850 | 5068.11 |
| transposase family protein | CC99x_003740 | Not Available | Negative | 831862 - 832605 | 28906.5 |
| hypothetical protein | CC99x_003745 | Not Available | Negative | 832565 - 833020 | 17251.5 |
| hypothetical protein | CC99x_003750 | Not Available | Positive | 833197 - 834744 | 57200.4 |
| fused mfs/spermidine synthase | CC99x_003755 | Not Available | Negative | 834767 - 836836 | 78263.5 |
| para family protein | CC99x_003760 | Not Available | Negative | 836844 - 837758 | 34607.6 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | CC99x_003765 | Not Available | Positive | 837884 - 839761 | 68899.2 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | CC99x_003770 | Not Available | Positive | 839774 - 840793 | 37501.2 |
| atp-binding protein | CC99x_003775 | Not Available | Negative | 840925 - 841470 | 21117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.