Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prka family serine protein kinase | CC99x_003680 | Not Available | Negative | 813303 - 815228 | 73938.1 |
| aminopeptidase n | CC99x_003685 | Not Available | Positive | 815421 - 818069 | 102073.0 |
| fumarylacetoacetate hydrolase family protein | CC99x_003690 | Not Available | Positive | 818288 - 818995 | 25586.6 |
| linear amide c-n hydrolase | CC99x_003695 | Not Available | Positive | 819178 - 820233 | 38922.3 |
| duf2835 family protein | CC99x_003700 | Not Available | Positive | 820365 - 820583 | 8185.99 |
| hypothetical protein | CC99x_003705 | Not Available | Positive | 820681 - 822315 | 61630.2 |
| ferrochelatase | CC99x_003710 | Not Available | Positive | 822317 - 823414 | 40300.6 |
| m48 family metalloprotease | CC99x_003715 | Not Available | Negative | 823329 - 824522 | 44082.6 |
| nad-glutamate dehydrogenase | CC99x_003720 | Not Available | Positive | 825111 - 830003 | 187847.0 |
| dihydroorotate dehydrogenase (quinone) | CC99x_003725 | Not Available | Positive | 830003 - 831031 | 37653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.