Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_003630 | Not Available | Negative | 796083 - 796976 | 34120.8 |
| class i poly(r)-hydroxyalkanoic acid synthase | CC99x_003635 | Not Available | Positive | 797098 - 798885 | 69008.0 |
| diguanylate cyclase | CC99x_003640 | Not Available | Positive | 799107 - 800168 | 39586.7 |
| duf2797 domain-containing protein | CC99x_003645 | Not Available | Positive | 800222 - 801046 | 30724.9 |
| hypothetical protein | CC99x_003650 | Not Available | Positive | 801342 - 804503 | 122297.0 |
| amino acid carrier protein | CC99x_003655 | Not Available | Negative | 804613 - 805983 | 50101.2 |
| efflux rnd transporter permease subunit | CC99x_003660 | Not Available | Negative | 806248 - 809364 | 115745.0 |
| efflux rnd transporter periplasmic adaptor subunit | CC99x_003665 | Not Available | Negative | 809361 - 810458 | 40928.2 |
| spovr family protein | CC99x_003670 | Not Available | Negative | 810462 - 811988 | 59953.3 |
| yeah/yhbh family protein | CC99x_003675 | Not Available | Negative | 812022 - 813290 | 48462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.