Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 784358 - 784434 | Not Available |
| endonuclease domain-containing protein | CC99x_003585 | Not Available | Positive | 784813 - 785172 | 14573.6 |
| ld-carboxypeptidase | CC99x_003590 | Not Available | Positive | 785309 - 786304 | 37636.0 |
| hypothetical protein | CC99x_003595 | Not Available | Negative | 786349 - 786672 | 12397.7 |
| hypothetical protein | CC99x_003600 | Not Available | Negative | 786669 - 786956 | 10855.9 |
| aminoglycoside phosphotransferase family protein | CC99x_003605 | Not Available | Positive | 787162 - 787914 | 28641.3 |
| hypothetical protein | CC99x_003610 | Not Available | Positive | 788230 - 789666 | 52523.1 |
| hypothetical protein | CC99x_003615 | Not Available | Positive | 790023 - 791720 | 65964.4 |
| hypothetical protein | CC99x_003620 | Not Available | Negative | 791783 - 794092 | 87149.0 |
| hypothetical protein | CC99x_003625 | Not Available | Positive | 794557 - 795837 | 50147.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.