Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | CC99x_003530 | Not Available | Positive | 774696 - 774995 | 10606.5 |
| alpha/beta hydrolase | CC99x_003535 | Not Available | Negative | 775061 - 776257 | 44394.6 |
| hdod domain-containing protein | CC99x_003540 | Not Available | Negative | 776373 - 777206 | 31306.9 |
| threonine--trna ligase | CC99x_003545 | Not Available | Positive | 777602 - 779509 | 72773.5 |
| translation initiation factor if-3 | CC99x_003550 | Not Available | Positive | 779553 - 780101 | 20623.6 |
| 50s ribosomal protein l35 | CC99x_003555 | Not Available | Positive | 780119 - 780328 | 7890.95 |
| 50s ribosomal protein l20 | CC99x_003560 | Not Available | Positive | 780347 - 780706 | 13596.7 |
| phenylalanine--trna ligase subunit alpha | CC99x_003565 | Not Available | Positive | 780862 - 781884 | 39074.0 |
| phenylalanine--trna ligase subunit beta | CC99x_003570 | Not Available | Positive | 781888 - 783963 | 77432.5 |
| integration host factor subunit alpha | CC99x_003575 | Not Available | Positive | 783966 - 784289 | 11872.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.