Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | CC99x_003380 | Not Available | Positive | 749487 - 750884 | 53398.3 |
| toll/interleukin-1 receptor domain-containing protein | CC99x_003385 | Not Available | Positive | 750891 - 751751 | 32481.9 |
| duf4917 family protein | CC99x_003390 | Not Available | Positive | 751837 - 752925 | 41103.1 |
| hypothetical protein | CC99x_003395 | Not Available | Negative | 752939 - 753400 | 17754.0 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | CC99x_003400 | Not Available | Negative | 753927 - 754178 | 9494.73 |
| helix-turn-helix domain-containing protein | CC99x_003405 | Not Available | Negative | 754182 - 754529 | 13031.6 |
| type ii toxin-antitoxin system rele/pare family toxin | CC99x_003410 | Not Available | Negative | 754534 - 754884 | 13669.9 |
| hypothetical protein | CC99x_003415 | Not Available | Negative | 755120 - 755257 | 5068.11 |
| transposase family protein | CC99x_003420 | Not Available | Negative | 755269 - 756438 | 45133.8 |
| hypothetical protein | CC99x_003425 | Not Available | Negative | 756513 - 757271 | 28990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.