Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CC99x_000210 | Not Available | Negative | 47178 - 47792 | 23271.5 |
| hypothetical protein | CC99x_000215 | Not Available | Negative | 47776 - 48984 | 44400.8 |
| permease-like cell division protein ftsx | CC99x_000220 | Not Available | Negative | 49012 - 50022 | 37522.3 |
| atp-binding cassette domain-containing protein | CC99x_000225 | Not Available | Negative | 50015 - 50665 | 24105.7 |
| signal recognition particle-docking protein ftsy | CC99x_000230 | Not Available | Negative | 50851 - 51834 | 35569.4 |
| insulinase family protein | CC99x_000235 | Not Available | Positive | 52322 - 53593 | 47770.9 |
| insulinase family protein | CC99x_000240 | Not Available | Positive | 53605 - 55011 | 52167.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CC99x_000245 | Not Available | Positive | 55008 - 55568 | 21298.9 |
| multifunctional cca addition/repair protein | CC99x_000250 | Not Available | Positive | 55570 - 56826 | 47616.6 |
| sam-dependent methyltransferase | CC99x_000255 | Not Available | Negative | 56871 - 58043 | 44326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.