Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_003280 | Not Available | Positive | 730917 - 731141 | 8102.86 |
| mgmt family protein | CC99x_003285 | Not Available | Positive | 731278 - 731607 | 12290.2 |
| ankyrin repeat domain-containing protein | CC99x_003290 | Not Available | Negative | 731692 - 735537 | 144373.0 |
| fic family protein | CC99x_003295 | Not Available | Positive | 735827 - 736102 | 10290.6 |
| sdr family oxidoreductase | CC99x_003300 | Not Available | Positive | 736168 - 736902 | 26103.5 |
| hypothetical protein | CC99x_003305 | Not Available | Positive | 737452 - 737619 | 6218.79 |
| deor family transcriptional regulator | CC99x_003310 | Not Available | Positive | 737725 - 737940 | 8233.32 |
| nuclear transport factor 2 family protein | CC99x_003315 | Not Available | Positive | 737963 - 738370 | 15788.8 |
| gnat family acetyltransferase | CC99x_003320 | Not Available | Positive | 738372 - 738962 | 23062.9 |
| hypothetical protein | CC99x_003325 | Not Available | Positive | 738944 - 739831 | 33293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.