Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | CC99x_003230 | Not Available | Positive | 719163 - 720101 | 35427.9 |
| cation-transporting p-type atpase | CC99x_003235 | Not Available | Negative | 720186 - 722945 | 100784.0 |
| pyridoxamine 5'-phosphate oxidase family protein | CC99x_003240 | Not Available | Positive | 723194 - 723775 | 22430.6 |
| outer membrane beta-barrel protein | CC99x_003245 | Not Available | Positive | 723856 - 724674 | 29885.6 |
| aminoglycoside phosphotransferase family protein | CC99x_003250 | Not Available | Positive | 724723 - 725691 | 37410.6 |
| fic family protein | CC99x_003255 | Not Available | Negative | 725769 - 727046 | 48484.1 |
| mgmt family protein | CC99x_003260 | Not Available | Negative | 727145 - 727276 | 4770.94 |
| trifunctional transcriptional activator/dna repair protein ada/methylated-dna--[protein]-cysteine s-methyltransferase | CC99x_003265 | Not Available | Negative | 727324 - 728376 | 39249.4 |
| methyltransferase domain-containing protein | CC99x_003270 | Not Available | Negative | 728725 - 729483 | 28761.6 |
| nadp-dependent oxidoreductase | CC99x_003275 | Not Available | Positive | 729865 - 730812 | 34479.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.