Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | CC99x_003180 | Not Available | Positive | 709872 - 710474 | 22268.9 |
| hypothetical protein | CC99x_003185 | Not Available | Positive | 710564 - 711577 | 39122.2 |
| hnh/endo vii family nuclease | CC99x_003190 | Not Available | Negative | 711733 - 712485 | 29766.7 |
| adp-ribosyltransferase | CC99x_003195 | Not Available | Negative | 712557 - 713705 | 43679.8 |
| hypothetical protein | CC99x_003200 | Not Available | Negative | 713734 - 713997 | 8867.8 |
| hypothetical protein | CC99x_003205 | Not Available | Negative | 714210 - 715556 | 49689.7 |
| stas domain-containing protein | CC99x_003210 | Not Available | Negative | 715605 - 715946 | 12116.6 |
| atp-binding protein | CC99x_003215 | Not Available | Negative | 715969 - 716388 | 15958.3 |
| spoiie family protein phosphatase | CC99x_003220 | Not Available | Negative | 716403 - 717566 | 43158.9 |
| sensor histidine kinase | CC99x_003225 | Not Available | Negative | 717581 - 718747 | 43960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.