Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | CC99x_003130 | Not Available | Negative | 696878 - 698239 | 49093.7 |
| nucleotide pyrophosphohydrolase | CC99x_003135 | Not Available | Positive | 698491 - 698829 | 13028.8 |
| lyse family transporter | CC99x_003140 | Not Available | Positive | 699063 - 699692 | 22572.6 |
| hypothetical protein | CC99x_003145 | Not Available | Negative | 699925 - 700113 | 6943.77 |
| cytochrome d ubiquinol oxidase subunit ii | CC99x_003150 | Not Available | Negative | 700097 - 701101 | 37649.0 |
| cytochrome ubiquinol oxidase subunit i | CC99x_003155 | Not Available | Negative | 701106 - 702521 | 53141.1 |
| hypothetical protein | CC99x_003160 | Not Available | Negative | 702686 - 703993 | 48783.1 |
| ankyrin repeat domain-containing protein | CC99x_003165 | Not Available | Negative | 703996 - 705798 | 68194.5 |
| hypothetical protein | CC99x_003170 | Not Available | Positive | 706025 - 707044 | 40455.0 |
| fad-binding protein | CC99x_003175 | Not Available | Positive | 707058 - 709859 | 105696.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.