Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | CC99x_002930 | Not Available | Positive | 654590 - 656104 | 56048.7 |
| translation initiation factor if-2 | CC99x_002935 | Not Available | Positive | 656129 - 658750 | 95014.4 |
| 30s ribosome-binding factor rbfa | CC99x_002940 | Not Available | Positive | 658792 - 659184 | 14714.5 |
| trna pseudouridine(55) synthase trub | CC99x_002945 | Not Available | Positive | 659188 - 660105 | 33726.8 |
| 30s ribosomal protein s15 | CC99x_002950 | Not Available | Positive | 660246 - 660515 | 10451.8 |
| polyribonucleotide nucleotidyltransferase | CC99x_002955 | Not Available | Positive | 660570 - 662687 | 76918.0 |
| hypothetical protein | CC99x_002960 | Not Available | Positive | 662808 - 663020 | 8616.22 |
| hypothetical protein | CC99x_002965 | Not Available | Positive | 663007 - 663972 | 36283.7 |
| hypothetical protein | CC99x_002970 | Not Available | Positive | 664147 - 664983 | 31030.2 |
| mapeg family protein | CC99x_002975 | Not Available | Positive | 664980 - 665363 | 13755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.